Source Code for Module TEES.Utils.Connection.LSFConnection

 1  from ClusterConnection import ClusterConnection 
 2   
 3  LSFJobTemplate = """#!/bin/sh 
 4  ##execution shell environment 
 5   
 6  ##Memory limit 
 7  #BSUB -M %memory 
 8  ##Max runtime 
 9  #BSUB -W %wallTime 
10  #BSUB -o %stdout 
11  #BSUB -e %stderr 
12  #BSUB -n %cores 
13   
14  mkdir -p %stderrDir 
15  mkdir -p %stdoutDir 
16   
17  %commands""" 
18   
19 -class LSFConnection(ClusterConnection): 
20      """ 
21      For using the Load Sharing Facility (LSF) of Platform Computing (www.platform.com). 
22      """ 
23 -    def __init__(self, account=None, workdir=None, settings=None, wallTime=None, memory=None, cores=None, modules=None): 
24          if wallTime == None: 
25              wallTime = "48:00" 
26          if memory == None: 
27              memory = 4194304 
28          #if modules == None: 
29          #    modules = ["java", "python"] 
30          ClusterConnection.__init__(self, account=account, workdir=workdir, settings=settings, memory=memory, cores=cores, modules=modules, wallTime=wallTime) 
31          self.submitCommand = "bsub" 
32          self.jobListCommand = "bjobs" 
33          self.jobTemplate = LSFJobTemplate 
34