Package TEES :: Package Utils :: Package STFormat :: Module Equiv

Module Equiv

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Functions

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process(documents, debug=False)
Resolves equivalences in place

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getRoots(document)
Returns topmost events in event hierarchy

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getArgs(event, argList)
Return the arguments of a nested event tree in a depth-first order.

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hasNestedEquivs(event)

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makeEvent(model, argCombination, count, newEvent=None, finished=False, duplDict=None, debug=False, level=0)
Given an argument list in depth-first order (argCombination), make a copy of "model" event tree.

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duplicateEquiv(event, duplDict, debug)
If the event (event tree) has arguments which have Equiv-statements, create a new event for each combination.

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rebuildEventList(events, eventList=None)
Add all events (top and nested) from event trees to a list.

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Variables

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thisPath = '/home/jari/TEES/Utils/STFormat'

__package__ = 'TEES.Utils.STFormat'

Function Details

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getArgs(event, argList)

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Return the arguments of a nested event tree in a depth-first order. Each argument is in a list, and has multiple items if that argument is a protein with Equivs.

duplicateEquiv(event, duplDict, debug)

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If the event (event tree) has arguments which have Equiv-statements, create a new event for each combination. Otherwise, return just the existing event.